2023
Evaluating the long-term portrayal of antibiotic resistance in major US newspapers
A Way, M Bond, B Nanna, ES Wright
BMC Public Health 23 (1), 1343, 2023
TJ De Wolfe, ES Wright
BMC microbiology 23 (1), 107, 2023
2022
Balancing trade-offs imposed by growth media and mass spectrometry for bacterial exometabolomics
AE Donnelly, N Narayanan, CMC Birer-Williams, TJ DeWolfe, RK Chu, CR Anderton, ES Wright
Applied and Environmental Microbiology 88 (20), e00922-22, 2022
J Brennan, L Jain, S Garman, AE Donnelly, ES Wright, K Jamieson
PLOS Computational Biology 18 (7), e1010311, 2022
FindNonCoding: rapid and simple dectection of non-coding RNAs in genomes
ES Wright
Bioinformatics 38 (3), 841-843, 2022
2021
AM Beckley, ES Wright
The Lancet Microbe 2 (10), e545-e554, 2021
Accurate annotation of protein coding sequences with IDTAXA
NP Cooley, ES Wright
NAR Genomics and Bioinformatics 3 (3), lqab080, 2021
SubTap, a versatile 3D printed platform for eavesdropping on extracellular interactions
CMC Birer-Williams, RK Chu, CR Anderton, ES Wright
Msystems 6 (4), 10.1128/msystems. 00902-21, 2021
Parallel evolution between genomic segments of seasonal human influenza viruses reveals RNA-RNA relationships
JE Jones, V Le Sage, GH Padovani, M Calderon, ES Wright, S Lakdawala
eLife, 2021
2021
Multi-stable bacterial communities exhibit extreme sensitivity to initial conditions
ES Wright, R Gupta, KH Vetsigian
FEMS Microbiology Ecology 97 (6), fiab073, 2021
Ten simple rules for hitting a home run with your elevator pitch
WR Morgan, ES Wright
PLoS Computational Biology 17 (3), e1008756, 2021
Discordance among antibiotic prescription guidelines reflects a lack of clear best practices
LM Rost, MH Nguyen, CJ Clancy, RK Shields, ES Wright
Open forum infectious diseases 8 (1), ofaa571, 2021
2020
SARS-CoV-2 genome evolution exposes early human adaptations
ES Wright, SS Lakdawala, VS Cooper
bioRxiv, 2020.05. 26.117069, 2020
ES Wright
RNA 26 (5), 531-540, 2020
AssessORF: combining evolutionary conservation and proteomics to assess prokaryotic gene predictions
DR Korandla, JM Wozniak, A Campeau, DJ Gonzalez, ES Wright
Bioinformatics 36 (4), 1022-1029, 2020
2019
Capturing the complex interplay between drugs and the intestinal microbiome
C Birer, ES Wright
Clinical pharmacology and therapeutics 106 (3), 501, 2019
ES Wright, KH Vetsigian
Molecular ecology 28 (17), 3915-3928, 2019
2018
Exclusivity offers a sound yet practical species criterion for bacteria despite abundant gene flow
ES Wright, DA Baum
BMC genomics 19, 1-12, 2018
IDTAXA: a novel approach for accurate taxonomic classification of microbiome sequences
Murali, A Bhargava, ES Wright
Microbiome 6, 1-14, 2018
2016
Quality filtering of Illumina index reads mitigates sample cross-talk
ES Wright, KH Vetsigian
BMC genomics 17, 1-7, 2016
DesignSignatures: a tool for designing primers that yields amplicons with distinct signatures
ES Wright, KH Vetsigian
Bioinformatics 32 (10), 1565-1567, 2016
Inhibitory interactions promote frequent bistability among competing bacteria
ES Wright, KH Vetsigian
Nature communications 7 (1), 11274, 2016
Using DECIPHER v2.0 to Analyze Big Biological Sequence Data in R
ES Wright
The R Journal 8 (1), 352-359, 2016
2015
DECIPHER: harnessing local sequence context to improve protein multiple sequence alignment
ES Wright
BMC bioinformatics 16, 1-14, 2015
2014
Mathematical tools to optimize the design of oligonucleotide probes and primers
DR Noguera, ES Wright, P Camejo, LS Yilmaz
Applied microbiology and biotechnology 98, 9595-9608, 2014
ES Wright, LS Yilmaz, AM Corcoran, HE Ökten, DR Noguera
Applied and environmental microbiology 80 (16), 5124-5133, 2014
ES Wright, LS Yilmaz, S Ram, JM Gasser, GW Harrington, DR Noguera
Environmental microbiology 16 (5), 1354-1365, 2014
2013
Identification of Bacterial and Archaeal Communities From Source to Tap
ES Wright, JM Strait, LS Yilmaz, GW Harrington, DR Noguera
Water Research Foundation, 2013
2012
LS Yilmaz, A Loy, ES Wright, M Wagner, DR Noguera
Public Library of Science 7 (8), e43862, 2012
DECIPHER, a search-based approach to chimera identification for 16S rRNA sequences
ES Wright, LS Yilmaz, DR Noguera
Applied and environmental microbiology 78 (3), 717-725, 2012
Contact Us
eswright@pitt.edu
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